Package: camtraptor 0.28.0

Damiano Oldoni

camtraptor: Read, Explore and Visualize Camera Trap Data Packages

Read, explore and visualize Camera Trap Data Packages (Camtrap DP). 'Camtrap DP' (<https://camtrap-dp.tdwg.org>) is a community developed data exchange format for this type of data. With camtraptor you can read and filter data, create overviews of observed species, relative abundance or effort, and plot these data on a map.

Authors:Damiano Oldoni [aut, cre], Peter Desmet [aut], Pieter Huybrechts [aut], Martijn Bollen [ctb], Raphaël Nussbaumer [ctb], Thierry Onkelinx [ctb], Jim Casaer [ctb], Lynn Pallemaerts [ctb], Nele Mullens [ctb], Research Institute for Nature and Forest [cph], Research Foundation - Flanders [fnd]

camtraptor_0.28.0.tar.gz
camtraptor_0.28.0.zip(r-4.7)camtraptor_0.28.0.zip(r-4.6)camtraptor_0.28.0.zip(r-4.5)
camtraptor_0.28.0.tgz(r-4.6-any)camtraptor_0.28.0.tgz(r-4.5-any)
camtraptor_0.28.0.tar.gz(r-4.7-any)camtraptor_0.28.0.tar.gz(r-4.6-any)
camtraptor_0.28.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
camtraptor/json (API)

# Install 'camtraptor' in R:
install.packages('camtraptor', repos = c('https://camera-traps.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/inbo/camtraptor/issues

Datasets:

On CRAN:

Conda:

camera-trapsoscibio

5.62 score 15 stars 20 scripts 33 exports 100 dependencies

Last updated from:0d86eacec1. Checks:7 NOTE, 2 OK. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE196
source / vignettesOK224
linux-release-x86_64NOTE233
macos-release-arm64NOTE445
macos-oldrel-arm64NOTE146
windows-develNOTE150
windows-releaseNOTE166
windows-oldrelNOTE145
wasm-releaseOK179

Exports:apply_filter_predicatecalc_animal_poscheck_speciesget_cam_opget_custom_effortget_detection_historyget_effortget_n_individualsget_n_obsget_n_speciesget_raiget_rai_individualsget_record_tableget_scientific_nameget_speciesmap_deppredpred_andpred_gtpred_gtepred_inpred_ltpred_ltepred_napred_notpred_notinpred_notnapred_orread_camtrap_dpread_wiround_coordinateswrite_dwcwrite_eml

Dependencies:activityaskpassassertthatbase64encbitbit64bslibcachemclassclassIntclicliprcpp11crayoncrosstalkcurlDBIdigestdplyre1071EMLemldevaluatefarverfastmapfontawesomefrictionlessfsgenericsgluehighrhmshtmltoolshtmlwidgetshttrjqrjquerylibjsonldjsonliteKernSmoothknitrlabelinglatticelazyevalleafletleaflet.providerslifecyclelubridatemagrittrMASSmemoisemimeopenssloverlappbapplypillarpkgconfigplyrpngprettyunitsprogressproxypurrrR6rappdirsrasterRColorBrewerRcppreadrreshape2rlangrmarkdowns2sassscalessfspstringistringrsuntoolssysterratibbletidyrtidyselecttimechangetinytextzdbunitsutf8uuidV8vctrsviridisLitevroomwithrwkxfunxml2yaml

Camera operation matrix
Setup | Station names | Session and camera IDs
Rendered fromcamera-operation-matrix.Rmdusingknitr::rmarkdown

Last update: 2023-11-10
Started: 2021-08-03

Record table
Setup | Species record table | Temporal independence | Exclude some species | Station names | Remove duplicates | Use filter predicates | Other arguments needed?
Rendered fromrecord-table.Rmdusingknitr::rmarkdown

Last update: 2023-11-10
Started: 2021-08-19

Visualize deployment features
Setup | Get taxonomic information | Create maps | Basic usage | Number of species | Number of observations | Number of individuals | RAI | RAI (individuals) | Effort | Clustering and hovering | Visualize deployments without detected animals | Use a color palette | Use a specific icon and color for zero values | Modify circle size | Use absolute scale | Use filter predicates
Rendered fromvisualize-deployment-features.Rmdusingknitr::rmarkdown

Last update: 2023-07-25
Started: 2021-03-29

Filter predicates
Setup | One argument - one value predicates | pred(), pred_not() | pred_gt(), pred_gte(), pred_lt(), pred_lte() | One argument - no value predicates | One argument - multiple value predicates | multiple predicates: pred_and() and pred_or() | How to use filter predicates | One predicate | Multiple predicates
Rendered fromfilter-predicates.Rmdusingknitr::rmarkdown

Last update: 2023-07-13
Started: 2021-05-17